Toggle navigation
BMDB
Browse
Metabolites
Biospecimens
Classes
Pathways
Proteins
Reactions
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Sequence Search
Advanced Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
NMR Search
Downloads
About
About the Bovine Metabolome Database
Citing the BMDB
Wishart Research Group
TMIC Wishart Node
Contact Us
metabolites
pathways
proteins
reactions
Search
Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
Showing structure for BMDB0004058 (5,6-Dihydroxyindole)
114683 -OEChem-03122000393D 18 19 0 0 0 0 0 0 0999 V2000 -2.7131 1.3832 -0.0003 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.7174 -1.3837 -0.0005 O 0 0 0 0 0 0 0 0 0 0 0 0 2.1650 1.1115 -0.0002 N 0 0 0 0 0 0 0 0 0 0 0 0 0.8573 0.6808 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8845 -0.7156 0.0001 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3353 1.4129 0.0001 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3370 -1.4177 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2528 -1.1065 0.0001 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.5345 0.6950 0.0005 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.5379 -0.6986 0.0005 C 0 0 0 0 0 0 0 0 0 0 0 0 3.0156 0.0386 -0.0002 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3278 2.4982 -0.0002 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.3388 -2.5043 -0.0003 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4543 2.0798 -0.0003 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6390 -2.1165 0.0001 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0864 0.1851 -0.0004 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4432 0.7400 -0.0002 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.5301 -2.3381 -0.0006 H 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 1 17 1 0 0 0 0 2 10 1 0 0 0 0 2 18 1 0 0 0 0 3 4 1 0 0 0 0 3 11 1 0 0 0 0 3 14 1 0 0 0 0 4 5 1 0 0 0 0 4 6 2 0 0 0 0 5 7 2 0 0 0 0 5 8 1 0 0 0 0 6 9 1 0 0 0 0 6 12 1 0 0 0 0 7 10 1 0 0 0 0 7 13 1 0 0 0 0 8 11 2 0 0 0 0 8 15 1 0 0 0 0 9 10 2 0 0 0 0 11 16 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 114683 > <PUBCHEM_CONFORMER_RMSD> 0.4 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 17 1 -0.53 10 0.08 11 -0.3 12 0.15 13 0.15 14 0.27 15 0.15 16 0.15 17 0.45 18 0.45 2 -0.53 3 0.03 4 -0.15 6 -0.15 7 -0.15 8 -0.15 9 0.08 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 0 > <PUBCHEM_PHARMACOPHORE_FEATURES> 6 1 1 donor 1 2 donor 1 3 cation 1 3 donor 5 3 4 5 8 11 rings 6 4 5 6 7 9 10 rings > <PUBCHEM_HEAVY_ATOM_COUNT> 11 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 0 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 23 > <PUBCHEM_CONFORMER_ID> 0001BFFB00000001 > <PUBCHEM_MMFF94_ENERGY> 18.4035 > <PUBCHEM_FEATURE_SELFOVERLAP> 30.542 > <PUBCHEM_SHAPE_FINGERPRINT> 10857977 72 18339913917753150570 11206711 2 18409165545311194269 12423570 1 12036033247349306088 12897270 3 18410854377901956838 12932764 1 17458904842872792764 13380535 76 18339637816018072751 14325111 11 18410573981057093312 16945 1 18194683665962383588 193761 8 15672386906411562594 19973954 147 18411139142844780084 20871998 184 18201722881264219559 21040471 1 18410855451786192516 21501502 16 18409729560274073198 23235685 24 18340199670406725824 23402655 69 18197200478871628477 23552423 10 18260832596329642006 23559900 14 18270966744423374454 241688 4 18408321085858014273 2748010 2 18411136935120696876 369184 2 18410854352047717994 5084963 1 18272373104602609650 528886 8 18339073800575028544 > <PUBCHEM_SHAPE_MULTIPOLES> 209.66 3.99 1.65 0.59 0.24 0.02 0 0.02 0 -0.53 0 0.03 0.01 0 > <PUBCHEM_SHAPE_SELFOVERLAP> 465.769 > <PUBCHEM_SHAPE_VOLUME> 113.8 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Download:
MOL
SDF
3D-SDF
PDB
SMILES
InChI
×
Structure for BMDB0004058 (5,6-Dihydroxyindole)