Toggle navigation
BMDB
Browse
Metabolites
Biospecimens
Classes
Pathways
Proteins
Reactions
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Sequence Search
Advanced Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
NMR Search
Downloads
About
About the Bovine Metabolome Database
Citing the BMDB
Wishart Research Group
TMIC Wishart Node
Contact Us
metabolites
pathways
proteins
reactions
Search
Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
Showing structure for BMDB0002430 ((3a,5b,7a)-23-Carboxy-7-hydroxy-24-norcholan-3-yl-b-D-Glucopyranosiduronic acid)
21252299 -OEChem-03232313113D 88 92 0 1 0 0 0 0 0999 V2000 -0.5046 1.0715 -2.5130 O 0 0 0 0 0 0 0 0 0 0 0 0 3.6842 -0.1176 -0.1499 O 0 0 0 0 0 0 0 0 0 0 0 0 5.9448 0.4390 0.2837 O 0 0 0 0 0 0 0 0 0 0 0 0 4.3074 -0.5938 -2.8180 O 0 0 0 0 0 0 0 0 0 0 0 0 -9.6605 -1.8111 1.6749 O 0 0 0 0 0 0 0 0 0 0 0 0 -9.0150 -0.0859 0.3469 O 0 0 0 0 0 0 0 0 0 0 0 0 6.3448 -2.6511 -2.4292 O 0 0 0 0 0 0 0 0 0 0 0 0 6.8603 -3.1123 0.3945 O 0 0 0 0 0 0 0 0 0 0 0 0 7.7782 -1.6088 2.4658 O 0 0 0 0 0 0 0 0 0 0 0 0 7.8876 0.6024 1.9232 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.8688 0.5906 -0.9620 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.8360 1.6538 -0.5590 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.7625 0.1382 0.2125 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.9159 1.0570 0.5595 C 0 0 1 0 0 0 0 0 0 0 0 0 0.1763 2.0918 1.0303 C 0 0 2 0 0 0 0 0 0 0 0 0 -4.6895 -0.8441 -0.5453 C 0 0 2 0 0 0 0 0 0 0 0 0 1.0069 2.5665 -0.2085 C 0 0 2 0 0 0 0 0 0 0 0 0 -2.8538 -0.5167 1.2601 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.7403 0.4390 1.7233 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.0225 2.1659 -1.7626 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.8691 0.9188 -2.0671 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0003 -0.1066 -1.8684 C 0 0 0 0 0 0 0 0 0 0 0 0 0.1130 3.1043 -1.3445 C 0 0 0 0 0 0 0 0 0 0 0 0 1.1522 1.4944 2.0869 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.5778 1.2805 0.8679 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9793 1.4868 -0.7290 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.9432 -1.3012 0.1864 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.4769 3.3253 1.7101 C 0 0 0 0 0 0 0 0 0 0 0 0 2.0760 0.4148 1.5400 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8901 0.9447 0.3679 C 0 0 1 0 0 0 0 0 0 0 0 0 -6.9971 -1.7978 -0.8244 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.5862 -2.3756 1.2190 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.2677 -2.3452 -0.1712 C 0 0 0 0 0 0 0 0 0 0 0 0 4.9093 0.3662 -0.6976 C 0 0 1 0 0 0 0 0 0 0 0 0 5.3570 -0.5213 -1.8591 C 0 0 1 0 0 0 0 0 0 0 0 0 -9.0027 -1.2801 0.6110 C 0 0 0 0 0 0 0 0 0 0 0 0 5.7297 -1.9195 -1.3680 C 0 0 2 0 0 0 0 0 0 0 0 0 6.2729 -0.8305 0.8440 C 0 0 1 0 0 0 0 0 0 0 0 0 6.7321 -1.8284 -0.2150 C 0 0 1 0 0 0 0 0 0 0 0 0 7.3883 -0.5042 1.7838 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.3023 -0.2875 -1.3145 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3692 2.5206 -0.1569 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.3896 0.2069 0.1042 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1058 -1.7365 -0.8200 H 0 0 0 0 0 0 0 0 0 0 0 0 1.6391 3.4074 0.1134 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3974 -1.4301 0.8591 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4076 -0.7979 2.1575 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.0788 -0.1304 2.3854 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1842 1.2295 2.3364 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6913 2.7135 -2.4375 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2542 1.9401 -1.9678 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4234 0.8287 -3.0630 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0489 -0.8053 -2.7106 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.9376 0.4586 -1.8356 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7406 3.3354 -2.2145 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.3258 4.0571 -1.0240 H 0 0 0 0 0 0 0 0 0 0 0 0 0.6068 1.1043 2.9528 H 0 0 0 0 0 0 0 0 0 0 0 0 1.7841 2.3011 2.4852 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3225 1.7088 0.1898 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1075 0.9243 1.7586 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9479 2.1076 1.2058 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5851 1.9043 -1.5425 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4460 0.6427 -1.1775 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.3975 -0.4658 0.7253 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2139 3.8253 1.0778 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9752 3.0525 2.6458 H 0 0 0 0 0 0 0 0 0 0 0 0 0.2818 4.0757 1.9635 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5068 -0.4736 1.2413 H 0 0 0 0 0 0 0 0 0 0 0 0 2.7558 0.0721 2.3301 H 0 0 0 0 0 0 0 0 0 0 0 0 3.5348 1.7498 0.7479 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.0298 1.4374 -3.2785 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.3140 -1.0013 -1.5038 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.5634 -2.5930 -1.4444 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.4697 -2.7242 1.7610 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.9207 -2.0100 1.9958 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1203 -3.2459 0.7449 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.0524 -3.2064 0.4670 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.9531 -2.6961 -0.9517 H 0 0 0 0 0 0 0 0 0 0 0 0 4.7684 1.3771 -1.0996 H 0 0 0 0 0 0 0 0 0 0 0 0 6.2242 -0.0654 -2.3533 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8397 -2.4892 -1.0774 H 0 0 0 0 0 0 0 0 0 0 0 0 5.4295 -1.2013 1.4392 H 0 0 0 0 0 0 0 0 0 0 0 0 7.7197 -1.5551 -0.6092 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6048 -1.1856 -3.5301 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.1362 -1.1248 2.1898 H 0 0 0 0 0 0 0 0 0 0 0 0 7.1222 -2.1513 -2.7315 H 0 0 0 0 0 0 0 0 0 0 0 0 7.5849 -3.0646 1.0404 H 0 0 0 0 0 0 0 0 0 0 0 0 8.5121 -1.4157 3.0874 H 0 0 0 0 0 0 0 0 0 0 0 0 1 20 1 0 0 0 0 1 71 1 0 0 0 0 2 30 1 0 0 0 0 2 34 1 0 0 0 0 3 34 1 0 0 0 0 3 38 1 0 0 0 0 4 35 1 0 0 0 0 4 84 1 0 0 0 0 5 36 1 0 0 0 0 5 85 1 0 0 0 0 6 36 2 0 0 0 0 7 37 1 0 0 0 0 7 86 1 0 0 0 0 8 39 1 0 0 0 0 8 87 1 0 0 0 0 9 40 1 0 0 0 0 9 88 1 0 0 0 0 10 40 2 0 0 0 0 11 12 1 0 0 0 0 11 13 1 0 0 0 0 11 21 1 0 0 0 0 11 41 1 0 0 0 0 12 14 1 0 0 0 0 12 20 1 0 0 0 0 12 42 1 0 0 0 0 13 16 1 0 0 0 0 13 18 1 0 0 0 0 13 25 1 0 0 0 0 14 15 1 0 0 0 0 14 19 1 0 0 0 0 14 43 1 0 0 0 0 15 17 1 0 0 0 0 15 24 1 0 0 0 0 15 28 1 0 0 0 0 16 22 1 0 0 0 0 16 27 1 0 0 0 0 16 44 1 0 0 0 0 17 23 1 0 0 0 0 17 26 1 0 0 0 0 17 45 1 0 0 0 0 18 19 1 0 0 0 0 18 46 1 0 0 0 0 18 47 1 0 0 0 0 19 48 1 0 0 0 0 19 49 1 0 0 0 0 20 23 1 0 0 0 0 20 50 1 0 0 0 0 21 22 1 0 0 0 0 21 51 1 0 0 0 0 21 52 1 0 0 0 0 22 53 1 0 0 0 0 22 54 1 0 0 0 0 23 55 1 0 0 0 0 23 56 1 0 0 0 0 24 29 1 0 0 0 0 24 57 1 0 0 0 0 24 58 1 0 0 0 0 25 59 1 0 0 0 0 25 60 1 0 0 0 0 25 61 1 0 0 0 0 26 30 1 0 0 0 0 26 62 1 0 0 0 0 26 63 1 0 0 0 0 27 31 1 0 0 0 0 27 32 1 0 0 0 0 27 64 1 0 0 0 0 28 65 1 0 0 0 0 28 66 1 0 0 0 0 28 67 1 0 0 0 0 29 30 1 0 0 0 0 29 68 1 0 0 0 0 29 69 1 0 0 0 0 30 70 1 0 0 0 0 31 33 1 0 0 0 0 31 72 1 0 0 0 0 31 73 1 0 0 0 0 32 74 1 0 0 0 0 32 75 1 0 0 0 0 32 76 1 0 0 0 0 33 36 1 0 0 0 0 33 77 1 0 0 0 0 33 78 1 0 0 0 0 34 35 1 0 0 0 0 34 79 1 0 0 0 0 35 37 1 0 0 0 0 35 80 1 0 0 0 0 37 39 1 0 0 0 0 37 81 1 0 0 0 0 38 39 1 0 0 0 0 38 40 1 0 0 0 0 38 82 1 0 0 0 0 39 83 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 21252299 > <PUBCHEM_CONFORMER_RMSD> 1.2 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 16 3 12 23 2 24 13 14 19 21 17 15 11 7 18 8 10 9 22 20 4 5 25 6 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 26 1 -0.68 10 -0.57 2 -0.56 20 0.28 3 -0.56 30 0.28 33 0.06 34 0.56 35 0.28 36 0.66 37 0.28 38 0.34 39 0.28 4 -0.68 40 0.66 5 -0.65 6 -0.57 7 -0.68 71 0.4 8 -0.68 84 0.4 85 0.5 86 0.4 87 0.4 88 0.5 9 -0.65 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 10.4 > <PUBCHEM_PHARMACOPHORE_FEATURES> 22 1 1 acceptor 1 1 donor 1 10 acceptor 1 2 acceptor 1 3 acceptor 1 32 hydrophobe 1 4 acceptor 1 4 donor 1 5 acceptor 1 6 acceptor 1 7 acceptor 1 7 donor 1 8 acceptor 1 8 donor 1 9 acceptor 3 5 6 36 anion 3 9 10 40 anion 5 11 13 16 21 22 rings 6 11 12 13 14 18 19 rings 6 12 14 15 17 20 23 rings 6 15 17 24 26 29 30 rings 6 3 34 35 37 38 39 rings > <PUBCHEM_HEAVY_ATOM_COUNT> 40 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 14 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 1 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 1 > <PUBCHEM_CONFORMER_ID> 014448CB00000001 > <PUBCHEM_MMFF94_ENERGY> 132.5691 > <PUBCHEM_FEATURE_SELFOVERLAP> 111.966 > <PUBCHEM_SHAPE_FINGERPRINT> 10 15 13901913323376073427 10029044 110 10447667777510597771 10533779 47 17560257885679733103 11374522 79 18260827068654615226 12013929 112 18041266722482892959 12047536 79 14835582253654382461 12120059 9 18200013063257663142 12422481 6 15554177973297080292 13150687 139 12468635010792594625 13673619 4 18335699468810857493 13690498 29 17313372436497292293 13782708 43 18409167726975219078 13811026 1 18131631158245152391 14068700 675 18408325479604828768 14664723 55 11674878870771750463 14931854 50 15719382941592591613 150020 25 12901550157030491129 15183329 4 15936410005865981026 15320295 40 16733250276308762468 15357212 105 12102692347503006546 15392192 104 14045741555738695212 15510800 12 18412265030046406998 16994733 274 8502375503909375287 18393751 57 15626226788579617981 19301679 30 17918002645764151124 19377110 9 16773782685845455568 19958102 18 16515685507825715570 20105231 36 17168145681279643475 2026 5 18187920638813339994 21033648 29 10231748973332427596 21223535 225 13407340812707209590 21792961 116 15574708080513059633 22149856 69 16774082869293337450 23559900 14 17970064663954162089 24771293 8 11023838288497310179 25269216 80 18410583855609166852 2838139 119 13118279227302662060 3383291 50 18341894116953021443 3418910 222 11386357150779550391 4112364 45 13470399010997515603 4258327 124 11530482246969586073 439807 62 17967812764702101451 44880168 125 18336823221582290031 504579 68 15213013860509931059 5104073 3 16701175258625888000 513202 73 17846495911816399609 59682541 52 14851601068988193450 6081469 158 17967527978611560751 9962374 69 17916293021848268087 > <PUBCHEM_SHAPE_MULTIPOLES> 764.49 26.24 3.1 2.4 10.77 0.32 0.53 -27.58 -6.52 -0.66 0.07 -2.41 0.06 1.75 > <PUBCHEM_SHAPE_SELFOVERLAP> 1612.581 > <PUBCHEM_SHAPE_VOLUME> 424.4 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Download:
MOL
SDF
3D-SDF
PDB
SMILES
InChI
×
Structure for BMDB0002430 ((3a,5b,7a)-23-Carboxy-7-hydroxy-24-norcholan-3-yl-b-D-Glucopyranosiduronic acid)