Record Information
Version1.0
Creation Date2016-09-30 22:28:41 UTC
Update Date2020-04-22 15:02:58 UTC
BMDB IDBMDB0000328
Secondary Accession Numbers
  • BMDB00328
Metabolite Identification
Common Name12-Ketodeoxycholic acid
Description12-Ketodeoxycholic acid, also known as 12-dehydrodeoxycholate or 12-ketolithocholate, belongs to the class of organic compounds known as monohydroxy bile acids, alcohols and derivatives. These are bile acids, alcohols or any of their derivatives bearing a hydroxyl group. 12-Ketodeoxycholic acid is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.
Structure
Thumb
Synonyms
ValueSource
12-KetodeoxycholateGenerator
(3a,5b)-3-Hydroxy-12-oxo-cholan-24-OateHMDB
(3a,5b)-3-Hydroxy-12-oxo-cholan-24-Oic acidHMDB
(3alpha,5beta)-3-Hydroxy-12-oxo-cholan-24-OateHMDB
(3alpha,5beta)-3-Hydroxy-12-oxo-cholan-24-Oic acidHMDB
12-DehydrodeoxycholateHMDB
12-Dehydrodeoxycholic acidHMDB
12-KetolithocholateHMDB
12-Ketolithocholic acidHMDB
12-oxo-3a-Hydroxy-5b-cholanateHMDB
12-oxo-3a-Hydroxy-5b-cholanic acidHMDB
12-OxolithocholateHMDB
12-Oxolithocholic acidHMDB
3a-Hydroxy-12-oxo-5b-cholan-24-OateHMDB
3a-Hydroxy-12-oxo-5b-cholan-24-Oic acidHMDB
3a-Hydroxy-12-oxo-5b-cholanateHMDB
3a-Hydroxy-12-oxo-5b-cholanic acidHMDB
3a-Hydroxy-12-oxo-5b-cholanoateHMDB
3a-Hydroxy-12-oxo-5b-cholanoic acidHMDB
3-Hydroxy-12-ketocholanoic acidHMDB
12-Ketolithocholic acid, (3beta,5beta)-isomerHMDB
3 alpha-Hydroxy-12-keto-5 beta-cholanoic acidHMDB
(4R)-4-[(1S,2S,5R,7R,10R,11S,14R,15R)-5-Hydroxy-2,15-dimethyl-16-oxotetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoateHMDB
Chemical FormulaC24H38O4
Average Molecular Weight390.5561
Monoisotopic Molecular Weight390.277009704
IUPAC Name(4R)-4-[(1S,2S,5R,7R,10R,11S,14R,15R)-5-hydroxy-2,15-dimethyl-16-oxotetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoic acid
Traditional Name12-ketolithocholic acid
CAS Registry Number5130-29-0
SMILES
[H][C@@]1(CC[C@@]2([H])[C@]3([H])CC[C@]4([H])C[C@H](O)CC[C@]4(C)[C@@]3([H])CC(=O)[C@]12C)[C@H](C)CCC(O)=O
InChI Identifier
InChI=1S/C24H38O4/c1-14(4-9-22(27)28)18-7-8-19-17-6-5-15-12-16(25)10-11-23(15,2)20(17)13-21(26)24(18,19)3/h14-20,25H,4-13H2,1-3H3,(H,27,28)/t14-,15-,16-,17+,18-,19+,20+,23+,24-/m1/s1
InChI KeyCVNYHSDFZXHMMJ-VPUMZWJWSA-N
Chemical Taxonomy
Description belongs to the class of organic compounds known as monohydroxy bile acids, alcohols and derivatives. These are bile acids, alcohols or any of their derivatives bearing a hydroxyl group.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentMonohydroxy bile acids, alcohols and derivatives
Alternative Parents
Substituents
  • Monohydroxy bile acid, alcohol, or derivatives
  • 3-hydroxysteroid
  • Hydroxysteroid
  • 3-alpha-hydroxysteroid
  • Oxosteroid
  • 12-oxosteroid
  • Cyclic alcohol
  • Secondary alcohol
  • Ketone
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Organic oxide
  • Alcohol
  • Organic oxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Ontology
StatusExpected but not Quantified
Origin
  • Endogenous
  • Exogenous
BiofunctionNot Available
ApplicationNot Available
Cellular locations
  • Cell membrane
  • Cytoplasm
Physical Properties
StateSolid
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.78ALOGPS
logP4.35ChemAxon
logS-4.5ALOGPS
pKa (Strongest Acidic)4.56ChemAxon
pKa (Strongest Basic)-1.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area74.6 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity108.37 m³·mol⁻¹ChemAxon
Polarizability45.52 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Spectra
Spectra
Biological Properties
Cellular Locations
  • Cell membrane
  • Cytoplasm
Biospecimen LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
HMDB IDHMDB0000328
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB021953
KNApSAcK IDNot Available
Chemspider ID2338365
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN ID5317
PubChem Compound3080612
PDB IDNot Available
ChEBI ID803536
References
Synthesis ReferenceSuzuki, Yoshinori; Okamura, Akio; Shimomura, Kazuo; Suzuki, Tadayuki. Purification of bile acids. Jpn. Kokai Tokkyo Koho (1985), 6 pp.
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available